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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162830806_162831105_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162830806 - 162831105

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TGATTCATATTT

Flanking Amino Acid:

SHLGKRKYHISALYVVDLKK

Intron Amino Acid Position:

1392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

83.8

0.84

73.6

41.8

Major PPT

92.1

0.95

0.5

89.1

19.9

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

49.7

0.06

1.8

70.24

40.7

Associated Gene:

Gene:

UGGT2

Ensembl Gene ID:

ENSAPLG00000011310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034413

162750123 - 162835046

84924

ENSAPLT00000011839

162750123 - 162835525

85403