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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162853655_162854742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162853655 - 162854742

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTGATTTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CAAGCTTTAATT

Flanking Amino Acid:

AISLLDEILAVCVWDAELRE

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

70.3

40.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

70.2

0.45

1.1

68.3

42.4

Minor 5ss

38.5

-1.3

3.3

54.8

43.4

Minor BPS

62.2

0.46

1.4

69.35

42.2

Associated Gene:

Gene:

DNAJC3

Ensembl Gene ID:

ENSAPLG00000011218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011759

162844769 - 162869971

25203