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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162865556_162869889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162865556 - 162869889

Intron Length:

4334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

GTTTTCATTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTCAAG

Flanking Amino Acid:

LIVLLDLRHHGAECGINADV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

63.5

42.9

Major BPS

100

1.24

0.5

100

Major PPT

71.7

0.49

1.1

69.2

40.9

Minor 5ss

34.8

-1.7

2.9

43.9

43.7

Minor BPS

52.9

-0

2.2

70.06

42.7

Associated Gene:

Gene:

DNAJC3

Ensembl Gene ID:

ENSAPLG00000011218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011759

162844769 - 162869971

25203