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Intron Name: Anas_platyrhynchos_platyrhynchos_1_162910351_162911264_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

162910351 - 162911264

Intron Length:

914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTTGTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

AACCCAGTAAGT

Flanking Amino Acid:

NGSSRKTSSITTPPFSSEEE

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

80.5

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

82.9

0.74

0.8

80.6

31.5

Minor 5ss

62.6

0.43

2.2

74.5

34.6

Minor BPS

41.5

-0.5

2.3

58.19

44.3

Associated Gene:

Gene:

DZIP1

Ensembl Gene ID:

ENSAPLG00000011935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012445

162883950 - 162915729

31780