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Intron Name: Anas_platyrhynchos_platyrhynchos_1_163009904_163012143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

163009904 - 163012143

Intron Length:

2240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGCCTTTTATT

Flanking Amino Acid:

SSEKLGEELQWYWDKEVQKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.77

0.9

84.8

35.4

Minor 5ss

34.1

-1.8

3.3

45.5

44.6

Minor BPS

0.43

1.6

76.99

39.9

Associated Gene:

Gene:

ABCC4

Ensembl Gene ID:

ENSAPLG00000012227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012900

162999142 - 163142406

143265

ENSAPLT00000024569

162999142 - 163137571

138430