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Intron Name: Anas_platyrhynchos_platyrhynchos_1_163279008_163280033_R

Intron Information:

Intron Rank:

142516

Intron Class:

major

Intron Phase:

Intron Coordinates:

163279008 - 163280033

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TTTTGCTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

TTCTTGGGATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.2

36.6

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

83.4

0.75

0.8

81.4

30.6

Minor 5ss

34.5

-1.8

2.8

48.2

40.4

Minor BPS

37.2

-0.9

2.6

53.93

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026936

163277679 - 163281879

4201