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Intron Name: Anas_platyrhynchos_platyrhynchos_1_163343057_163343336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

163343057 - 163343336

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

FISLLQQNRKCCIHGSGLQR

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.8

33.3

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

42.3

-0.9

2.5

50.7

40.4

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

TGDS

Ensembl Gene ID:

ENSAPLG00000013769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014346

163333968 - 163345850

11883

ENSAPLT00000025059

163333968 - 163346832

12865

ENSAPLT00000018020

163334553 - 163346832

12280