Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_163380793_163382520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

163380793 - 163382520

Intron Length:

1728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGGCCT

5'SS Class:

major

3'SS Sequence:

CCTGAATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TATGCCTGAATT

Flanking Amino Acid:

HAAANDPIFVVLHSFTDAIF

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

61.4

42.7

Major BPS

70.8

0.52

70.6

31.6

Major PPT

74.1

0.54

0.9

69.4

40.5

Minor 5ss

39.6

-1.2

3.3

53.9

44.3

Minor BPS

68.5

0.66

1.5

82.19

39.2

Associated Gene:

Gene:

DCT

Ensembl Gene ID:

ENSAPLG00000013837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014438

163367528 - 163397173

29646