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Intron Name: Anas_platyrhynchos_platyrhynchos_1_163408222_163408675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

163408222 - 163408675

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

ATTTTCCTAACT

Flanking Amino Acid:

NGNDVNFQDTSDETSGSGSG

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.9

29.9

Major BPS

0.55

71.8

31.4

Major PPT

72.3

0.5

39.7

Minor 5ss

35.5

-1.6

44.2

37.3

Minor BPS

74.1

0.83

1.6

91.01

31.7

Associated Gene:

Gene:

GPC6

Ensembl Gene ID:

ENSAPLG00000026575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047080

163408019 - 163481181

73163