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Intron Name: Anas_platyrhynchos_platyrhynchos_1_163418781_163469265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

163418781 - 163469265

Intron Length:

50485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TGTCTCTTAATC

Flanking Amino Acid:

TAAGTSLDRLVTDIKEKLKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

67.6

39.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

70.9

0.47

70.6

Minor 5ss

30.2

-2.3

3.2

35.2

42.4

Minor BPS

73.6

0.72

1.2

76.33

33.4

Associated Gene:

Gene:

GPC6

Ensembl Gene ID:

ENSAPLG00000026575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047080

163408019 - 163481181

73163