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Intron Name: Anas_platyrhynchos_platyrhynchos_1_163768006_163771911_R

Intron Information:

Intron Rank:

144164

Intron Class:

major

Intron Phase:

Intron Coordinates:

163768006 - 163771911

Intron Length:

3906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTGCATATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

0.24

2.3

84.93

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026276

163767939 - 163781222

13284