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Intron Name: Anas_platyrhynchos_platyrhynchos_1_164989928_164994647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

164989928 - 164994647

Intron Length:

4720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTTT

5'SS Class:

major

3'SS Sequence:

ACTGTAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATGACTGTAATT

Flanking Amino Acid:

PCWNGEDVVRRPDMGSNSIS

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

37.9

Major BPS

73.1

0.58

79.6

29.1

Major PPT

68.1

0.41

41.2

Minor 5ss

52.2

0.08

2.8

76.1

39.6

Minor BPS

50.8

0.1

70.49

41.2

Associated Gene:

Gene:

GPC5

Ensembl Gene ID:

ENSAPLG00000007039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007299

164989741 - 165145762

156022