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Intron Name: Anas_platyrhynchos_platyrhynchos_1_165188481_165190278_R

Intron Information:

Intron Rank:

130140

Intron Class:

major

Intron Phase:

Intron Coordinates:

165188481 - 165190278

Intron Length:

1798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATTTTCAAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

87.5

0.84

0.6

81.5

30.5

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

55.6

0.25

1.9

78.67

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034372

165182697 - 165214848

32152

ENSAPLT00000026412

165188163 - 165191055

2893