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Intron Name: Anas_platyrhynchos_platyrhynchos_1_165189407_165190278_R

Intron Information:

Intron Rank:

130148

Intron Class:

major

Intron Phase:

Intron Coordinates:

165189407 - 165190278

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

CATCCATCCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

76.1

0.59

72.5

42.4

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

44.6

-0.3

2.2

64.43

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042404

165188163 - 165191055

2893

ENSAPLT00000037255

165188163 - 165207137

18975