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Intron Name: Anas_platyrhynchos_platyrhynchos_1_165717797_165800161_F

Intron Information:

Intron Rank:

140380

Intron Class:

major

Intron Phase:

Intron Coordinates:

165717797 - 165800161

Intron Length:

82365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTAATTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTCCTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

38.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.8

0.76

0.8

77.6

34.4

Minor 5ss

39.1

-1.2

2.9

49.8

46.4

Minor BPS

63.5

0.5

1.3

71.97

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030334

165717370 - 165859642

142273