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Intron Name: Anas_platyrhynchos_platyrhynchos_1_16665771_16668130_R

Intron Information:

Intron Rank:

135054

Intron Class:

major

Intron Phase:

Intron Coordinates:

16665771 - 16668130

Intron Length:

2360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGTT

5'SS Class:

major

3'SS Sequence:

TTTGTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

ATCCATAGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.1

78.9

35.3

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

88.8

0.87

0.7

36.6

Minor 5ss

41.9

-0.9

3.5

64.8

46.5

Minor BPS

43.1

-0.4

1.7

58.76

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026688

16665247 - 16693949

28703