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Intron Name: Anas_platyrhynchos_platyrhynchos_1_16696780_16697666_F

Intron Information:

Intron Rank:

131659

Intron Class:

major

Intron Phase:

Intron Coordinates:

16696780 - 16697666

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAGAA

5'SS Class:

major

3'SS Sequence:

TCCTGTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TGAGCCTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

0.9

69.2

30.2

Major BPS

0.62

1.1

77.2

Major PPT

74.8

0.56

71.1

38.6

Minor 5ss

24.4

-2.9

3.1

25.9

38.1

Minor BPS

56.9

0.3

1.9

73.32

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037963

16696124 - 16697825

1702