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Intron Name: Anas_platyrhynchos_platyrhynchos_1_167394000_167410042_F

Intron Information:

Intron Rank:

132013

Intron Class:

major

Intron Phase:

Intron Coordinates:

167394000 - 167410042

Intron Length:

16043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TATTGTATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

72.5

0.56

1.1

63.4

Major PPT

91.4

0.93

0.6

87.5

22.7

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

46.1

-0.2

2.2

69.6

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043730

167393863 - 167421205

27343