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Intron Name: Anas_platyrhynchos_platyrhynchos_1_16789886_16797836_F

Intron Information:

Intron Rank:

143436

Intron Class:

major

Intron Phase:

Intron Coordinates:

16789886 - 16797836

Intron Length:

7951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TCTTTTTGCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TCTTTTTGCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

71.2

40.3

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

82.4

0.73

0.8

79.1

32.9

Minor 5ss

36.8

-1.5

2.9

52.3

44.3

Minor BPS

50.4

1.9

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042756

16789687 - 16798260

8574