Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_168128581_168142562_R

Intron Information:

Intron Rank:

141331

Intron Class:

major

Intron Phase:

Intron Coordinates:

168128581 - 168142562

Intron Length:

13982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGATT

5'SS Class:

major

3'SS Sequence:

TAATATTCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TTTTCCTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

71.6

39.6

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

68.4

0.41

42.3

Minor 5ss

31.8

-2.1

3.5

48.5

47.3

Minor BPS

93.3

1.36

0.6

95.44

19.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039316

168127846 - 168142787

14942