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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1683828_1705811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1683828 - 1705811

Intron Length:

21984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTG

5'SS Class:

major

3'SS Sequence:

CCCGCTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTGCTTTTAACA

Flanking Amino Acid:

ARRDSEAQKRRLKQEQAYVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

72.6

39.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

67.9

0.4

0.8

61.4

29.1

Minor 5ss

46.3

-0.4

2.4

58.6

Minor BPS

0.47

1.3

67.7

39.3

Associated Gene:

Gene:

CHCHD3

Ensembl Gene ID:

ENSAPLG00000005618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005804

1658579 - 1751514

92936

ENSAPLT00000042299

1657693 - 1809286

151594

ENSAPLT00000017919

1657693 - 1806853

149161