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Intron Name: Anas_platyrhynchos_platyrhynchos_1_168999245_169004296_R

Intron Information:

Intron Rank:

139281

Intron Class:

major

Intron Phase:

Intron Coordinates:

168999245 - 169004296

Intron Length:

5052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTTGG

5'SS Class:

major

3'SS Sequence:

GTCTTTCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTCTGCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.3

62.3

44.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

78.2

0.63

0.8

72.5

32.4

Minor 5ss

41.1

-1

2.5

50.1

46.2

Minor BPS

49.1

0.01

2.3

77.59

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041327

168999026 - 169005507

6482