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Intron Name: Anas_platyrhynchos_platyrhynchos_1_169118_215401_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

169118 - 215401

Intron Length:

46284

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCGGCGGT

5'SS Class:

major

3'SS Sequence:

GAGCAGGGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGAGCAG

U12 Branch Point Sequence:

GTCCCCCGAGCA

Flanking Amino Acid:

LVQMQEAAAGPRAPPRPGSA

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.29

1.3

59.4

42.2

Major BPS

34.9

-0.9

1.5

34.8

42.2

Major PPT

45.1

-0.2

1.2

27.2

41.6

Minor 5ss

21.3

-3.3

4.1

29.1

43.5

Minor BPS

-0.4

55.87

42.3

Associated Gene:

Gene:

SHANK3

Ensembl Gene ID:

ENSAPLG00000008650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009001

4776 - 289936

285161