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Intron Name: Anas_platyrhynchos_platyrhynchos_1_16922512_17049432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16922512 - 17049432

Intron Length:

126921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAG

U12 Branch Point Sequence:

ATTCAGTGACTC

Flanking Amino Acid:

PGCFQDAFELGQLAAGTCEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

55.9

0.15

1.5

39.8

Major PPT

88.2

0.86

0.8

80.5

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

38.9

-0.8

2.3

52.12

Associated Gene:

Gene:

TAFA5

Ensembl Gene ID:

ENSAPLG00000029978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035598

16820224 - 17254308

434085

ENSAPLT00000021968

16820224 - 17178990

358767