Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_169576019_169577857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

169576019 - 169577857

Intron Length:

1839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAATC

5'SS Class:

major

3'SS Sequence:

ATTTTGTGTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

TTTTGTGTAAAG

Flanking Amino Acid:

VQGIYLEQLGKTGKETHD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

72.5

37.2

Major BPS

68.5

0.46

73.3

28.9

Major PPT

66.8

0.38

1.2

67.3

42.4

Minor 5ss

36.3

-1.6

3.3

51.9

44.8

Minor BPS

-0.3

2.4

63.96

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003375

169575995 - 169578373

2379