Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_169984180_170152237_R

Intron Information:

Intron Rank:

144377

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

169984180 - 170152237

Intron Length:

168058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTATTTCCT

5'SS Class:

weak_major

3'SS Sequence:

TGGCCCAAGAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ATAATATAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.1

55.6

Major BPS

74.5

0.61

79.6

29.1

Major PPT

42.6

-0.4

1.7

39.6

38.2

Minor 5ss

45.6

-0.5

2.8

65.9

39.1

Minor BPS

46.9

-0.1

1.9

64.8

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024949

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048203

169983148 - 170152440

169293