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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170259668_170261536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170259668 - 170261536

Intron Length:

1869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTAGCTTTAATA

Flanking Amino Acid:

SSLRSIPSAEGNKSYSGSIQ

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

77.7

31.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

82.2

0.73

0.7

81.5

30.5

Minor 5ss

41.5

-0.9

2.7

54.2

42.9

Minor BPS

71.6

0.67

1.3

75.68

36.2

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471