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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170267677_170272180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170267677 - 170272180

Intron Length:

4504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATTCTT

5'SS Class:

major

3'SS Sequence:

TGTTCTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

AATTATTTAACT

Flanking Amino Acid:

MLDILIKHLVKVSLHSQQNL

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

77.4

37.4

Major BPS

0.72

78.4

31.2

Major PPT

77.5

0.62

78.4

33.9

Minor 5ss

41.9

-0.9

3.1

59.7

38.7

Minor BPS

73.2

0.81

1.4

84.86

34.8

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471