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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170276308_170277476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170276308 - 170277476

Intron Length:

1169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTTTCTTATCT

Flanking Amino Acid:

LPAIISKKEEMFLNEAGFNF

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

78.2

36.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.1

0.7

0.8

73.5

36.9

Minor 5ss

43.7

-0.7

2.9

59.5

38.8

Minor BPS

72.9

0.8

1.6

87.15

38.9

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471