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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170277517_170278516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170277517 - 170278516

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGGATA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TGACATTTCATG

Flanking Amino Acid:

WLEAMDGKEPIYTLPAIISK

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

72.1

39.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

91.2

0.93

0.7

84.6

Minor 5ss

38.8

-1.3

3.4

58.5

45.8

Minor BPS

43.7

-0.6

1.9

47.32

39.8

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471