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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170278596_170279185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170278596 - 170279185

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGAATT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

ATGTTTTTGACA

Flanking Amino Acid:

RFCFDIEVFERPGIITLQAF

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

82.4

29.8

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

0.58

72.7

41.8

Minor 5ss

40.1

-1.1

3.1

57.1

47.2

Minor BPS

67.6

0.55

1.2

71.39

34.7

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471