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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170280396_170283722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170280396 - 170283722

Intron Length:

3327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

CTCTTTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTCTCTTTAATT

Flanking Amino Acid:

MEGYLYVQEKRPLGFTWVKH

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.2

79.3

31.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.1

0.57

0.9

74.5

Minor 5ss

-2.2

2.6

32.5

35.1

Minor BPS

76.8

0.92

1.2

82.98

39.3

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471