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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170283853_170287211_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

170283853 - 170287211

Intron Length:

3359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGGATA

5'SS Class:

major

3'SS Sequence:

TTTGGGGTGTTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TGTGGATTGATT

Flanking Amino Acid:

KQQLQFNLQNTRNNFESTRQ

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.3

78.7

37.2

Major BPS

68.1

0.45

58.1

38.5

Major PPT

59.9

0.22

1.1

58.1

47.3

Minor 5ss

37.2

-1.4

3.3

47.8

41.5

Minor BPS

46.9

-0.1

2.1

68.65

42.6

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471