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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170287317_170294842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170287317 - 170294842

Intron Length:

7526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTACCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TGCTATTCAATT

Flanking Amino Acid:

EKKKFEFVEPLLAFLQGLFT

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

0.82

0.8

83.9

25.3

Major PPT

87.5

0.84

0.7

29.6

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

52.5

0.16

1.7

69.73

41.6

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471