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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170294954_170299241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170294954 - 170299241

Intron Length:

4288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCACT

5'SS Class:

major

3'SS Sequence:

TTTTGCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

ACATCTATATTT

Flanking Amino Acid:

AKKKESHLQDADTQIDREHQ

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

77.4

37.4

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

0.77

0.7

Minor 5ss

44.5

-0.6

2.9

63.8

40.4

Minor BPS

47.9

-0

1.8

63.75

41.1

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016740

170256244 - 170411714

155471