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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170299344_170318910_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170299344 - 170318910

Intron Length:

19567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCAAAT

U12 Branch Point Sequence:

GTTGGCAAAAAT

Flanking Amino Acid:

FRKEQIGAAKDGKKKFDKES

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

59.5

0.24

1.2

67.3

37.8

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

-0.6

2.3

62.74

46.7

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016740

170256244 - 170411714

155471