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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170353114_170372960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170353114 - 170372960

Intron Length:

19847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GACTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

TTTTTCTTGACT

Flanking Amino Acid:

DAETDDEINIAQSLKEFARL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.93

0.8

83.5

Major BPS

73.9

0.59

65.3

41.6

Major PPT

83.1

0.74

0.8

80.5

36.8

Minor 5ss

39.5

-1.2

2.8

48.4

41.7

Minor BPS

87.9

1.28

0.8

98.86

22.7

Associated Gene:

Gene:

ARHGAP42

Ensembl Gene ID:

ENSAPLG00000016036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043970

170256244 - 170411714

155471

ENSAPLT00000016740

170256244 - 170411714

155471