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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170515244_170516765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170515244 - 170516765

Intron Length:

1522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGACCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ACTTTTTTGACC

Flanking Amino Acid:

ANESDVMGYKVLFRQEGQSN

Intron Amino Acid Position:

1011

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

34.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

75.2

0.57

0.8

70.3

35.1

Minor 5ss

28.4

-2.5

34.8

41.6

Minor BPS

68.1

0.55

1.1

70.75

34.9

Associated Gene:

Gene:

CNTN5

Ensembl Gene ID:

ENSAPLG00000013194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030904

170513787 - 171194530

680744

ENSAPLT00000013801

170513787 - 171065134

551348

ENSAPLT00000038521

170513787 - 171117977

604191

ENSAPLT00000037828

170513787 - 170811329

297543