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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170541224_170550423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170541224 - 170550423

Intron Length:

9200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

PSRLIRTNEAVPKTPPANVS

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.4

0.8

80.1

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

CNTN5

Ensembl Gene ID:

ENSAPLG00000013194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038521

170513787 - 171117977

604191

ENSAPLT00000037828

170513787 - 170811329

297543

ENSAPLT00000030904

170513787 - 171194530

680744

ENSAPLT00000013801

170513787 - 171065134

551348