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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170551891_170564646_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

170551891 - 170564646

Intron Length:

12756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CACTTTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTCTGTTTGATT

Flanking Amino Acid:

VSDETELLVRGPPGPPGVVI

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.2

39.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

71.2

0.48

0.9

Minor 5ss

30.2

-2.3

2.6

28.5

Minor BPS

60.3

0.4

1.8

78.04

39.4

Associated Gene:

Gene:

CNTN5

Ensembl Gene ID:

ENSAPLG00000013194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013801

170513787 - 171065134

551348

ENSAPLT00000038521

170513787 - 171117977

604191

ENSAPLT00000037828

170513787 - 170811329

297543

ENSAPLT00000030904

170513787 - 171194530

680744