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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1705957_1751109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1705957 - 1751109

Intron Length:

45153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTTCA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

CTTTCTTGATCC

Flanking Amino Acid:

EEERQKAQRFAKQLEEKDRE

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

68.5

31.9

Major BPS

83.8

0.84

73.6

41.8

Major PPT

92.2

0.95

0.5

92.5

17.5

Minor 5ss

37.6

-1.4

2.9

47.5

42.3

Minor BPS

58.4

0.24

1.8

70.84

40.8

Associated Gene:

Gene:

CHCHD3

Ensembl Gene ID:

ENSAPLG00000005618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042299

1657693 - 1809286

151594

ENSAPLT00000017919

1657693 - 1806853

149161

ENSAPLT00000005804

1658579 - 1751514

92936