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Intron Name: Anas_platyrhynchos_platyrhynchos_1_170904692_171003889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

170904692 - 171003889

Intron Length:

99198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTGGAT

5'SS Class:

major

3'SS Sequence:

TTTGTCTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTCTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

65.9

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.6

0.53

0.9

67.8

38.9

Minor 5ss

29.6

-2.3

3.8

49.3

Minor BPS

80.5

0.95

84.28

28.2

Associated Gene:

Gene:

CNTN5

Ensembl Gene ID:

ENSAPLG00000013194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038521

170513787 - 171117977

604191

ENSAPLT00000030904

170513787 - 171194530

680744

ENSAPLT00000013801

170513787 - 171065134

551348