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Intron Name: Anas_platyrhynchos_platyrhynchos_1_171004032_171065098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

171004032 - 171065098

Intron Length:

61067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTACGTATC

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

CTATATATATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.2

69.3

41.6

Major BPS

71.4

0.53

67.3

39.3

Major PPT

88.1

0.86

0.8

80.8

36.8

Minor 5ss

41.2

-1

3.1

54.9

42.5

Minor BPS

44.5

-0.3

1.9

62.34

42.1

Associated Gene:

Gene:

CNTN5

Ensembl Gene ID:

ENSAPLG00000013194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013801

170513787 - 171065134

551348