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Intron Name: Anas_platyrhynchos_platyrhynchos_1_171785422_171802755_R

Intron Information:

Intron Rank:

132103

Intron Class:

major

Intron Phase:

Intron Coordinates:

171785422 - 171802755

Intron Length:

17334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTCAG

5'SS Class:

major

3'SS Sequence:

TTCTTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

GTTTCTTTTTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

62.2

43.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

91.4

0.93

0.6

91.5

19.8

Minor 5ss

36.5

-1.5

51.2

45.1

Minor BPS

45.7

-0.2

3.6

80.6

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032529

171785158 - 171803520

18363