Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_171802860_171803140_R

Intron Information:

Intron Rank:

132104

Intron Class:

major

Intron Phase:

Intron Coordinates:

171802860 - 171803140

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATATTA

5'SS Class:

major

3'SS Sequence:

GTGCCTTCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CTTGTCTTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

70.6

36.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

66.3

0.37

0.9

58.2

38.4

Minor 5ss

41.1

-1

3.1

48.2

47.4

Minor BPS

49.5

0.05

70.48

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032529

171785158 - 171803520

18363