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Intron Name: Anas_platyrhynchos_platyrhynchos_1_171865170_171867428_R

Intron Information:

Intron Rank:

130385

Intron Class:

major

Intron Phase:

Intron Coordinates:

171865170 - 171867428

Intron Length:

2259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TTCTTCTTTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

87.8

0.85

0.6

24.3

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

65.4

0.48

1.6

74.24

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023471

171865116 - 171868768

3653