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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172033754_172036407_R

Intron Information:

Intron Rank:

137493

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

172033754 - 172036407

Intron Length:

2654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCCC

5'SS Class:

major

3'SS Sequence:

AAAATGCACATAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.3

70.1

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

49.3

-0

40.2

38.4

Minor 5ss

30.9

-2.2

2.7

37.3

39.8

Minor BPS

76.9

0.84

1.2

83.98

29.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025102

172026196 - 172039544

13349