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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172039095_172039466_R

Intron Information:

Intron Rank:

137499

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

172039095 - 172039466

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

ACATATCAAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TATTTGATAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.1

24.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

58.2

0.19

1.1

52.7

40.7

Minor 5ss

44.3

-0.6

2.9

62.8

Minor BPS

49.1

-0

2.2

67.89

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039997

172009712 - 172045734

36023

ENSAPLT00000031392

172026196 - 172039544

13349