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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172039545_172044950_R

Intron Information:

Intron Rank:

137503

Intron Class:

major

Intron Phase:

Intron Coordinates:

172039545 - 172044950

Intron Length:

5406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCATTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ACTGTGTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.8

35.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

65.7

0.35

62.2

38.8

Minor 5ss

40.6

-1

2.8

52.8

44.1

Minor BPS

45.6

-0.2

2.3

64.98

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039997

172009712 - 172045734

36023