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Intron Name: Anas_platyrhynchos_platyrhynchos_1_172171928_172172801_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172171928 - 172172801

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTAGC

5'SS Class:

strong_major

3'SS Sequence:

AAATGTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GATTCTTTAATG

Flanking Amino Acid:

SRSRWKDRYKERVDCYPNVH

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.4

39.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

74.4

0.55

70.2

44.7

Minor 5ss

-1.7

2.9

45.9

42.2

Minor BPS

72.8

0.58

1.3

69.25

38.3

Associated Gene:

Gene:

CCDC82

Ensembl Gene ID:

ENSAPLG00000004583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004711

172167312 - 172180180

12869